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        MultiQC: Summarize analysis results for multiple tools and samples in a single report
        Philip Ewels, Måns Magnusson, Sverker Lundin and Max Käller
        Bioinformatics (2016)
        doi: 10.1093/bioinformatics/btw354
        PMID: 27312411

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        MultiQC is published in Bioinformatics:

        MultiQC: Summarize analysis results for multiple tools and samples in a single report
        Philip Ewels, Måns Magnusson, Sverker Lundin and Max Käller
        Bioinformatics (2016)
        doi: 10.1093/bioinformatics/btw354
        PMID: 27312411

        A modular tool to aggregate results from bioinformatics analyses across many samples into a single report.

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        Report generated on 2018-02-03, 14:35 based on data in: /gpfs/home/b042/greenland_2017/platesGH/platesGH_combined


        General Statistics

        Showing 380/380 rows and 3/5 columns.
        Sample Name% Dups% GCM Seqs
        Sample_PRO1747_PlateG_A10_R1
        25.9%
        34%
        13.1
        Sample_PRO1747_PlateG_A10_R2
        52.7%
        34%
        13.1
        Sample_PRO1747_PlateG_A11_R1
        22.3%
        34%
        11.6
        Sample_PRO1747_PlateG_A11_R2
        48.2%
        34%
        11.6
        Sample_PRO1747_PlateG_A12_R1
        31.8%
        35%
        9.0
        Sample_PRO1747_PlateG_A12_R2
        61.6%
        35%
        9.0
        Sample_PRO1747_PlateG_A1_R1
        20.6%
        34%
        11.7
        Sample_PRO1747_PlateG_A1_R2
        45.8%
        35%
        11.7
        Sample_PRO1747_PlateG_A2_R1
        29.3%
        33%
        15.0
        Sample_PRO1747_PlateG_A2_R2
        58.7%
        33%
        15.0
        Sample_PRO1747_PlateG_A3_R1
        25.1%
        34%
        15.1
        Sample_PRO1747_PlateG_A3_R2
        53.5%
        34%
        15.1
        Sample_PRO1747_PlateG_A4_R1
        22.1%
        32%
        10.9
        Sample_PRO1747_PlateG_A4_R2
        52.8%
        32%
        10.9
        Sample_PRO1747_PlateG_A5_R1
        22.3%
        34%
        15.6
        Sample_PRO1747_PlateG_A5_R2
        43.8%
        34%
        15.6
        Sample_PRO1747_PlateG_A6_R1
        25.0%
        34%
        12.2
        Sample_PRO1747_PlateG_A6_R2
        52.2%
        34%
        12.2
        Sample_PRO1747_PlateG_A7_R1
        26.5%
        34%
        15.1
        Sample_PRO1747_PlateG_A7_R2
        51.0%
        34%
        15.1
        Sample_PRO1747_PlateG_A8_R1
        22.8%
        34%
        12.5
        Sample_PRO1747_PlateG_A8_R2
        48.7%
        34%
        12.5
        Sample_PRO1747_PlateG_A9_R1
        20.8%
        33%
        18.0
        Sample_PRO1747_PlateG_A9_R2
        43.0%
        33%
        18.0
        Sample_PRO1747_PlateG_B10_R1
        31.1%
        33%
        8.2
        Sample_PRO1747_PlateG_B10_R2
        62.1%
        33%
        8.2
        Sample_PRO1747_PlateG_B11_R1
        28.4%
        34%
        12.2
        Sample_PRO1747_PlateG_B11_R2
        59.7%
        34%
        12.2
        Sample_PRO1747_PlateG_B12_R1
        25.9%
        35%
        12.1
        Sample_PRO1747_PlateG_B12_R2
        55.4%
        35%
        12.1
        Sample_PRO1747_PlateG_B1_R1
        23.0%
        33%
        17.6
        Sample_PRO1747_PlateG_B1_R2
        50.0%
        33%
        17.6
        Sample_PRO1747_PlateG_B2_R1
        37.2%
        32%
        17.4
        Sample_PRO1747_PlateG_B2_R2
        67.0%
        32%
        17.4
        Sample_PRO1747_PlateG_B3_R1
        39.5%
        34%
        13.5
        Sample_PRO1747_PlateG_B3_R2
        68.8%
        34%
        13.5
        Sample_PRO1747_PlateG_B4_R1
        35.1%
        34%
        14.9
        Sample_PRO1747_PlateG_B4_R2
        64.8%
        34%
        14.9
        Sample_PRO1747_PlateG_B5_R1
        19.2%
        35%
        10.4
        Sample_PRO1747_PlateG_B5_R2
        46.4%
        34%
        10.4
        Sample_PRO1747_PlateG_B6_R1
        19.2%
        34%
        9.7
        Sample_PRO1747_PlateG_B6_R2
        44.4%
        34%
        9.7
        Sample_PRO1747_PlateG_B7_R1
        41.0%
        30%
        10.9
        Sample_PRO1747_PlateG_B7_R2
        68.8%
        30%
        10.9
        Sample_PRO1747_PlateG_B8_R1
        7.0%
        36%
        1.0
        Sample_PRO1747_PlateG_B8_R2
        24.0%
        35%
        1.0
        Sample_PRO1747_PlateG_B9_R1
        26.2%
        34%
        16.3
        Sample_PRO1747_PlateG_B9_R2
        55.1%
        34%
        16.3
        Sample_PRO1747_PlateG_C10_R1
        29.1%
        35%
        14.3
        Sample_PRO1747_PlateG_C10_R2
        56.6%
        35%
        14.3
        Sample_PRO1747_PlateG_C11_R1
        27.3%
        34%
        12.9
        Sample_PRO1747_PlateG_C11_R2
        54.7%
        34%
        12.9
        Sample_PRO1747_PlateG_C12_R1
        32.1%
        35%
        13.9
        Sample_PRO1747_PlateG_C12_R2
        59.8%
        35%
        13.9
        Sample_PRO1747_PlateG_C1_R1
        38.2%
        33%
        14.4
        Sample_PRO1747_PlateG_C1_R2
        67.9%
        33%
        14.4
        Sample_PRO1747_PlateG_C2_R1
        15.3%
        35%
        9.7
        Sample_PRO1747_PlateG_C2_R2
        35.2%
        35%
        9.7
        Sample_PRO1747_PlateG_C3_R1
        24.6%
        35%
        9.7
        Sample_PRO1747_PlateG_C3_R2
        52.5%
        35%
        9.7
        Sample_PRO1747_PlateG_C4_R1
        23.0%
        34%
        12.2
        Sample_PRO1747_PlateG_C4_R2
        44.6%
        34%
        12.2
        Sample_PRO1747_PlateG_C5_R1
        21.9%
        34%
        14.8
        Sample_PRO1747_PlateG_C5_R2
        40.9%
        34%
        14.8
        Sample_PRO1747_PlateG_C6_R1
        19.0%
        35%
        8.9
        Sample_PRO1747_PlateG_C6_R2
        44.8%
        35%
        8.9
        Sample_PRO1747_PlateG_C7_R1
        22.8%
        32%
        15.3
        Sample_PRO1747_PlateG_C7_R2
        48.3%
        32%
        15.3
        Sample_PRO1747_PlateG_C8_R1
        22.4%
        32%
        11.0
        Sample_PRO1747_PlateG_C8_R2
        49.7%
        32%
        11.0
        Sample_PRO1747_PlateG_C9_R1
        25.4%
        34%
        12.0
        Sample_PRO1747_PlateG_C9_R2
        55.1%
        34%
        12.0
        Sample_PRO1747_PlateG_D10_R1
        28.3%
        34%
        6.3
        Sample_PRO1747_PlateG_D10_R2
        59.6%
        34%
        6.3
        Sample_PRO1747_PlateG_D11_R1
        28.5%
        35%
        13.1
        Sample_PRO1747_PlateG_D11_R2
        58.8%
        35%
        13.1
        Sample_PRO1747_PlateG_D12_R1
        29.8%
        34%
        13.6
        Sample_PRO1747_PlateG_D12_R2
        58.3%
        34%
        13.6
        Sample_PRO1747_PlateG_D1_R1
        21.3%
        34%
        10.0
        Sample_PRO1747_PlateG_D1_R2
        47.8%
        34%
        10.0
        Sample_PRO1747_PlateG_D2_R1
        30.3%
        34%
        10.0
        Sample_PRO1747_PlateG_D2_R2
        62.5%
        34%
        10.0
        Sample_PRO1747_PlateG_D3_R1
        27.8%
        34%
        15.5
        Sample_PRO1747_PlateG_D3_R2
        53.9%
        34%
        15.5
        Sample_PRO1747_PlateG_D4_R1
        25.0%
        34%
        12.6
        Sample_PRO1747_PlateG_D4_R2
        52.2%
        34%
        12.6
        Sample_PRO1747_PlateG_D5_R1
        19.1%
        34%
        10.4
        Sample_PRO1747_PlateG_D5_R2
        41.9%
        34%
        10.4
        Sample_PRO1747_PlateG_D6_R1
        18.5%
        34%
        11.3
        Sample_PRO1747_PlateG_D6_R2
        40.7%
        34%
        11.3
        Sample_PRO1747_PlateG_D7_R1
        24.6%
        35%
        12.9
        Sample_PRO1747_PlateG_D7_R2
        52.6%
        35%
        12.9
        Sample_PRO1747_PlateG_D8_R1
        27.6%
        34%
        11.0
        Sample_PRO1747_PlateG_D8_R2
        57.6%
        34%
        11.0
        Sample_PRO1747_PlateG_D9_R1
        33.3%
        32%
        12.9
        Sample_PRO1747_PlateG_D9_R2
        64.0%
        32%
        12.9
        Sample_PRO1747_PlateG_E10_R1
        26.2%
        35%
        3.0
        Sample_PRO1747_PlateG_E10_R2
        58.8%
        35%
        3.0
        Sample_PRO1747_PlateG_E11_R1
        28.7%
        35%
        10.5
        Sample_PRO1747_PlateG_E11_R2
        58.8%
        35%
        10.5
        Sample_PRO1747_PlateG_E12_R1
        18.5%
        35%
        7.1
        Sample_PRO1747_PlateG_E12_R2
        46.1%
        35%
        7.1
        Sample_PRO1747_PlateG_E1_R1
        22.6%
        36%
        16.5
        Sample_PRO1747_PlateG_E1_R2
        51.3%
        36%
        16.5
        Sample_PRO1747_PlateG_E2_R1
        31.1%
        35%
        14.8
        Sample_PRO1747_PlateG_E2_R2
        60.9%
        35%
        14.8
        Sample_PRO1747_PlateG_E3_R1
        25.4%
        32%
        16.4
        Sample_PRO1747_PlateG_E3_R2
        53.0%
        32%
        16.4
        Sample_PRO1747_PlateG_E4_R1
        22.1%
        33%
        9.9
        Sample_PRO1747_PlateG_E4_R2
        52.1%
        33%
        9.9
        Sample_PRO1747_PlateG_E5_R1
        22.3%
        34%
        12.7
        Sample_PRO1747_PlateG_E5_R2
        45.3%
        34%
        12.7
        Sample_PRO1747_PlateG_E6_R1
        28.2%
        35%
        17.3
        Sample_PRO1747_PlateG_E6_R2
        55.1%
        35%
        17.3
        Sample_PRO1747_PlateG_E7_R1
        30.0%
        34%
        9.2
        Sample_PRO1747_PlateG_E7_R2
        61.0%
        34%
        9.2
        Sample_PRO1747_PlateG_E8_R1
        30.6%
        35%
        13.2
        Sample_PRO1747_PlateG_E8_R2
        60.5%
        35%
        13.2
        Sample_PRO1747_PlateG_E9_R1
        29.7%
        35%
        13.2
        Sample_PRO1747_PlateG_E9_R2
        59.6%
        35%
        13.2
        Sample_PRO1747_PlateG_F10_R1
        18.3%
        31%
        5.1
        Sample_PRO1747_PlateG_F10_R2
        48.3%
        31%
        5.1
        Sample_PRO1747_PlateG_F11_R1
        17.7%
        32%
        13.0
        Sample_PRO1747_PlateG_F11_R2
        37.4%
        32%
        13.0
        Sample_PRO1747_PlateG_F12_R1
        25.7%
        34%
        7.8
        Sample_PRO1747_PlateG_F12_R2
        59.7%
        35%
        7.8
        Sample_PRO1747_PlateG_F1_R1
        29.6%
        32%
        13.5
        Sample_PRO1747_PlateG_F1_R2
        60.2%
        32%
        13.5
        Sample_PRO1747_PlateG_F2_R1
        14.8%
        34%
        11.2
        Sample_PRO1747_PlateG_F2_R2
        35.7%
        34%
        11.2
        Sample_PRO1747_PlateG_F3_R1
        23.8%
        34%
        11.7
        Sample_PRO1747_PlateG_F3_R2
        52.8%
        34%
        11.7
        Sample_PRO1747_PlateG_F4_R1
        25.9%
        34%
        10.4
        Sample_PRO1747_PlateG_F4_R2
        52.5%
        33%
        10.4
        Sample_PRO1747_PlateG_F5_R1
        26.7%
        35%
        15.9
        Sample_PRO1747_PlateG_F5_R2
        52.9%
        35%
        15.9
        Sample_PRO1747_PlateG_F6_R1
        30.8%
        33%
        9.7
        Sample_PRO1747_PlateG_F6_R2
        60.7%
        33%
        9.7
        Sample_PRO1747_PlateG_F7_R1
        31.1%
        34%
        7.7
        Sample_PRO1747_PlateG_F7_R2
        62.6%
        34%
        7.7
        Sample_PRO1747_PlateG_F8_R1
        19.4%
        36%
        9.3
        Sample_PRO1747_PlateG_F8_R2
        40.6%
        35%
        9.3
        Sample_PRO1747_PlateG_F9_R1
        19.1%
        34%
        13.6
        Sample_PRO1747_PlateG_F9_R2
        42.7%
        34%
        13.6
        Sample_PRO1747_PlateG_G10_R1
        26.5%
        34%
        11.6
        Sample_PRO1747_PlateG_G10_R2
        54.8%
        34%
        11.6
        Sample_PRO1747_PlateG_G11_R1
        20.7%
        34%
        10.6
        Sample_PRO1747_PlateG_G11_R2
        41.9%
        34%
        10.6
        Sample_PRO1747_PlateG_G12_R1
        26.9%
        34%
        13.3
        Sample_PRO1747_PlateG_G12_R2
        52.5%
        34%
        13.3
        Sample_PRO1747_PlateG_G1_R1
        17.6%
        35%
        11.9
        Sample_PRO1747_PlateG_G1_R2
        38.4%
        35%
        11.9
        Sample_PRO1747_PlateG_G2_R1
        32.0%
        32%
        14.2
        Sample_PRO1747_PlateG_G2_R2
        61.5%
        32%
        14.2
        Sample_PRO1747_PlateG_G3_R1
        30.7%
        33%
        13.8
        Sample_PRO1747_PlateG_G3_R2
        63.0%
        33%
        13.8
        Sample_PRO1747_PlateG_G4_R1
        18.9%
        32%
        7.0
        Sample_PRO1747_PlateG_G4_R2
        48.0%
        32%
        7.0
        Sample_PRO1747_PlateG_G5_R1
        20.5%
        36%
        9.2
        Sample_PRO1747_PlateG_G5_R2
        46.5%
        36%
        9.2
        Sample_PRO1747_PlateG_G6_R1
        22.8%
        36%
        12.8
        Sample_PRO1747_PlateG_G6_R2
        50.3%
        36%
        12.8
        Sample_PRO1747_PlateG_G7_R1
        24.1%
        34%
        9.9
        Sample_PRO1747_PlateG_G7_R2
        52.2%
        34%
        9.9
        Sample_PRO1747_PlateG_G8_R1
        17.7%
        35%
        13.0
        Sample_PRO1747_PlateG_G8_R2
        38.3%
        35%
        13.0
        Sample_PRO1747_PlateG_G9_R1
        23.6%
        36%
        13.1
        Sample_PRO1747_PlateG_G9_R2
        48.9%
        36%
        13.1
        Sample_PRO1747_PlateG_H10_R1
        22.3%
        34%
        12.7
        Sample_PRO1747_PlateG_H10_R2
        45.9%
        34%
        12.7
        Sample_PRO1747_PlateG_H11_R1
        35.7%
        32%
        14.4
        Sample_PRO1747_PlateG_H11_R2
        66.7%
        32%
        14.4
        Sample_PRO1747_PlateG_H12_R1
        19.9%
        35%
        11.2
        Sample_PRO1747_PlateG_H12_R2
        40.6%
        35%
        11.2
        Sample_PRO1747_PlateG_H1_R1
        18.8%
        32%
        11.8
        Sample_PRO1747_PlateG_H1_R2
        42.3%
        32%
        11.8
        Sample_PRO1747_PlateG_H2_R1
        21.6%
        35%
        12.0
        Sample_PRO1747_PlateG_H2_R2
        48.5%
        35%
        12.0
        Sample_PRO1747_PlateG_H3_R1
        21.4%
        34%
        12.5
        Sample_PRO1747_PlateG_H3_R2
        48.4%
        34%
        12.5
        Sample_PRO1747_PlateG_H4_R1
        17.1%
        34%
        7.1
        Sample_PRO1747_PlateG_H4_R2
        40.5%
        33%
        7.1
        Sample_PRO1747_PlateG_H5_R1
        21.8%
        36%
        9.4
        Sample_PRO1747_PlateG_H5_R2
        46.1%
        35%
        9.4
        Sample_PRO1747_PlateG_H6_R1
        17.4%
        34%
        7.1
        Sample_PRO1747_PlateG_H6_R2
        44.6%
        34%
        7.1
        Sample_PRO1747_PlateG_H7_R1
        22.6%
        35%
        10.7
        Sample_PRO1747_PlateG_H7_R2
        49.0%
        35%
        10.7
        Sample_PRO1747_PlateG_H8_R1
        21.1%
        33%
        9.0
        Sample_PRO1747_PlateG_H8_R2
        48.8%
        33%
        9.0
        Sample_PRO1747_PlateG_H9_R1
        18.0%
        34%
        12.3
        Sample_PRO1747_PlateG_H9_R2
        39.6%
        34%
        12.3
        Sample_PRO1747_PlateH_A10_R1
        55.5%
        35%
        13.1
        Sample_PRO1747_PlateH_A10_R2
        54.8%
        35%
        13.1
        Sample_PRO1747_PlateH_A11_R1
        66.9%
        34%
        17.3
        Sample_PRO1747_PlateH_A11_R2
        65.7%
        34%
        17.3
        Sample_PRO1747_PlateH_A12_R1
        62.6%
        36%
        10.5
        Sample_PRO1747_PlateH_A12_R2
        62.9%
        36%
        10.5
        Sample_PRO1747_PlateH_A1_R1
        49.2%
        35%
        11.4
        Sample_PRO1747_PlateH_A1_R2
        48.6%
        35%
        11.4
        Sample_PRO1747_PlateH_A2_R1
        45.5%
        32%
        14.9
        Sample_PRO1747_PlateH_A2_R2
        44.7%
        32%
        14.9
        Sample_PRO1747_PlateH_A3_R1
        49.8%
        36%
        15.7
        Sample_PRO1747_PlateH_A3_R2
        48.8%
        36%
        15.7
        Sample_PRO1747_PlateH_A4_R1
        58.3%
        33%
        12.8
        Sample_PRO1747_PlateH_A4_R2
        58.2%
        33%
        12.8
        Sample_PRO1747_PlateH_A5_R1
        30.4%
        34%
        11.6
        Sample_PRO1747_PlateH_A5_R2
        29.9%
        34%
        11.6
        Sample_PRO1747_PlateH_A6_R1
        45.0%
        35%
        13.4
        Sample_PRO1747_PlateH_A6_R2
        44.6%
        35%
        13.4
        Sample_PRO1747_PlateH_A7_R1
        60.4%
        34%
        13.1
        Sample_PRO1747_PlateH_A7_R2
        59.2%
        34%
        13.1
        Sample_PRO1747_PlateH_A8_R1
        65.3%
        34%
        10.7
        Sample_PRO1747_PlateH_A8_R2
        65.8%
        34%
        10.7
        Sample_PRO1747_PlateH_A9_R1
        17.3%
        35%
        0.0
        Sample_PRO1747_PlateH_A9_R2
        17.4%
        35%
        0.0
        Sample_PRO1747_PlateH_B10_R1
        52.9%
        35%
        12.4
        Sample_PRO1747_PlateH_B10_R2
        51.7%
        35%
        12.4
        Sample_PRO1747_PlateH_B11_R1
        57.8%
        34%
        10.4
        Sample_PRO1747_PlateH_B11_R2
        58.0%
        34%
        10.4
        Sample_PRO1747_PlateH_B12_R1
        47.0%
        33%
        11.3
        Sample_PRO1747_PlateH_B12_R2
        47.0%
        33%
        11.3
        Sample_PRO1747_PlateH_B1_R1
        44.4%
        35%
        9.5
        Sample_PRO1747_PlateH_B1_R2
        46.3%
        35%
        9.5
        Sample_PRO1747_PlateH_B2_R1
        38.4%
        31%
        10.6
        Sample_PRO1747_PlateH_B2_R2
        38.6%
        32%
        10.6
        Sample_PRO1747_PlateH_B3_R1
        56.0%
        34%
        12.9
        Sample_PRO1747_PlateH_B3_R2
        55.1%
        34%
        12.9
        Sample_PRO1747_PlateH_B4_R1
        13.2%
        33%
        0.0
        Sample_PRO1747_PlateH_B4_R2
        13.4%
        33%
        0.0
        Sample_PRO1747_PlateH_B5_R1
        41.9%
        34%
        15.1
        Sample_PRO1747_PlateH_B5_R2
        41.3%
        34%
        15.1
        Sample_PRO1747_PlateH_B6_R1
        59.1%
        35%
        12.1
        Sample_PRO1747_PlateH_B6_R2
        57.4%
        35%
        12.1
        Sample_PRO1747_PlateH_B7_R1
        12.3%
        35%
        0.0
        Sample_PRO1747_PlateH_B7_R2
        12.3%
        35%
        0.0
        Sample_PRO1747_PlateH_B8_R1
        70.6%
        34%
        12.3
        Sample_PRO1747_PlateH_B8_R2
        69.3%
        34%
        12.3
        Sample_PRO1747_PlateH_B9_R1
        64.8%
        33%
        9.4
        Sample_PRO1747_PlateH_B9_R2
        64.0%
        33%
        9.4
        Sample_PRO1747_PlateH_C10_R1
        42.4%
        33%
        10.9
        Sample_PRO1747_PlateH_C10_R2
        42.5%
        33%
        10.9
        Sample_PRO1747_PlateH_C11_R1
        53.5%
        34%
        11.0
        Sample_PRO1747_PlateH_C11_R2
        52.4%
        34%
        11.0
        Sample_PRO1747_PlateH_C12_R1
        41.4%
        35%
        9.5
        Sample_PRO1747_PlateH_C12_R2
        43.0%
        35%
        9.5
        Sample_PRO1747_PlateH_C1_R1
        44.3%
        31%
        10.7
        Sample_PRO1747_PlateH_C1_R2
        44.0%
        31%
        10.7
        Sample_PRO1747_PlateH_C3_R1
        57.6%
        35%
        12.0
        Sample_PRO1747_PlateH_C3_R2
        57.7%
        36%
        12.0
        Sample_PRO1747_PlateH_C4_R1
        32.7%
        33%
        10.8
        Sample_PRO1747_PlateH_C4_R2
        33.3%
        33%
        10.8
        Sample_PRO1747_PlateH_C5_R1
        69.4%
        35%
        6.1
        Sample_PRO1747_PlateH_C5_R2
        69.5%
        35%
        6.1
        Sample_PRO1747_PlateH_C6_R1
        65.2%
        36%
        11.9
        Sample_PRO1747_PlateH_C6_R2
        63.3%
        36%
        11.9
        Sample_PRO1747_PlateH_C7_R1
        57.9%
        36%
        4.1
        Sample_PRO1747_PlateH_C7_R2
        58.6%
        36%
        4.1
        Sample_PRO1747_PlateH_C8_R1
        63.4%
        34%
        8.8
        Sample_PRO1747_PlateH_C8_R2
        64.0%
        34%
        8.8
        Sample_PRO1747_PlateH_C9_R1
        68.0%
        38%
        10.0
        Sample_PRO1747_PlateH_C9_R2
        67.2%
        38%
        10.0
        Sample_PRO1747_PlateH_D10_R1
        50.9%
        34%
        11.8
        Sample_PRO1747_PlateH_D10_R2
        50.7%
        34%
        11.8
        Sample_PRO1747_PlateH_D11_R1
        60.5%
        36%
        13.3
        Sample_PRO1747_PlateH_D11_R2
        59.1%
        36%
        13.3
        Sample_PRO1747_PlateH_D12_R1
        49.2%
        33%
        11.7
        Sample_PRO1747_PlateH_D12_R2
        49.8%
        33%
        11.7
        Sample_PRO1747_PlateH_D1_R1
        47.9%
        34%
        13.8
        Sample_PRO1747_PlateH_D1_R2
        47.3%
        34%
        13.8
        Sample_PRO1747_PlateH_D2_R1
        38.7%
        35%
        10.4
        Sample_PRO1747_PlateH_D2_R2
        39.7%
        35%
        10.4
        Sample_PRO1747_PlateH_D3_R1
        59.6%
        36%
        13.2
        Sample_PRO1747_PlateH_D3_R2
        58.7%
        36%
        13.2
        Sample_PRO1747_PlateH_D4_R1
        45.2%
        33%
        13.6
        Sample_PRO1747_PlateH_D4_R2
        44.4%
        33%
        13.6
        Sample_PRO1747_PlateH_D5_R1
        5.8%
        36%
        0.0
        Sample_PRO1747_PlateH_D5_R2
        5.8%
        37%
        0.0
        Sample_PRO1747_PlateH_D6_R1
        65.4%
        34%
        10.2
        Sample_PRO1747_PlateH_D6_R2
        65.5%
        34%
        10.2
        Sample_PRO1747_PlateH_D7_R1
        58.5%
        34%
        12.3
        Sample_PRO1747_PlateH_D7_R2
        58.7%
        33%
        12.3
        Sample_PRO1747_PlateH_D8_R1
        52.1%
        35%
        11.2
        Sample_PRO1747_PlateH_D8_R2
        52.0%
        35%
        11.2
        Sample_PRO1747_PlateH_D9_R1
        63.4%
        34%
        11.6
        Sample_PRO1747_PlateH_D9_R2
        62.4%
        34%
        11.6
        Sample_PRO1747_PlateH_E10_R1
        62.4%
        35%
        13.5
        Sample_PRO1747_PlateH_E10_R2
        61.0%
        35%
        13.5
        Sample_PRO1747_PlateH_E11_R1
        49.1%
        34%
        13.7
        Sample_PRO1747_PlateH_E11_R2
        48.0%
        34%
        13.7
        Sample_PRO1747_PlateH_E12_R1
        61.6%
        36%
        12.4
        Sample_PRO1747_PlateH_E12_R2
        60.2%
        36%
        12.4
        Sample_PRO1747_PlateH_E1_R1
        54.0%
        34%
        11.7
        Sample_PRO1747_PlateH_E1_R2
        53.5%
        34%
        11.7
        Sample_PRO1747_PlateH_E2_R1
        38.5%
        36%
        9.8
        Sample_PRO1747_PlateH_E2_R2
        39.0%
        36%
        9.8
        Sample_PRO1747_PlateH_E3_R1
        57.5%
        35%
        11.8
        Sample_PRO1747_PlateH_E3_R2
        57.8%
        35%
        11.8
        Sample_PRO1747_PlateH_E4_R1
        39.8%
        33%
        11.0
        Sample_PRO1747_PlateH_E4_R2
        39.5%
        33%
        11.0
        Sample_PRO1747_PlateH_E5_R1
        59.3%
        34%
        12.3
        Sample_PRO1747_PlateH_E5_R2
        58.8%
        34%
        12.3
        Sample_PRO1747_PlateH_E6_R1
        49.2%
        34%
        11.9
        Sample_PRO1747_PlateH_E6_R2
        48.5%
        34%
        11.9
        Sample_PRO1747_PlateH_E7_R1
        49.8%
        34%
        10.9
        Sample_PRO1747_PlateH_E7_R2
        49.9%
        34%
        10.9
        Sample_PRO1747_PlateH_E8_R1
        59.2%
        35%
        11.3
        Sample_PRO1747_PlateH_E8_R2
        57.8%
        35%
        11.3
        Sample_PRO1747_PlateH_E9_R1
        56.7%
        35%
        10.8
        Sample_PRO1747_PlateH_E9_R2
        56.5%
        35%
        10.8
        Sample_PRO1747_PlateH_F10_R1
        36.4%
        35%
        10.0
        Sample_PRO1747_PlateH_F10_R2
        36.6%
        35%
        10.0
        Sample_PRO1747_PlateH_F11_R1
        39.4%
        33%
        12.1
        Sample_PRO1747_PlateH_F11_R2
        38.8%
        33%
        12.1
        Sample_PRO1747_PlateH_F12_R1
        97.7%
        38%
        14.8
        Sample_PRO1747_PlateH_F12_R2
        96.0%
        38%
        14.8
        Sample_PRO1747_PlateH_F1_R1
        57.2%
        35%
        7.3
        Sample_PRO1747_PlateH_F1_R2
        57.5%
        35%
        7.3
        Sample_PRO1747_PlateH_F2_R1
        27.3%
        40%
        7.0
        Sample_PRO1747_PlateH_F2_R2
        28.0%
        40%
        7.0
        Sample_PRO1747_PlateH_F3_R1
        41.4%
        33%
        11.7
        Sample_PRO1747_PlateH_F3_R2
        41.1%
        33%
        11.7
        Sample_PRO1747_PlateH_F4_R1
        36.1%
        33%
        11.7
        Sample_PRO1747_PlateH_F4_R2
        35.6%
        33%
        11.7
        Sample_PRO1747_PlateH_F5_R1
        62.8%
        34%
        12.6
        Sample_PRO1747_PlateH_F5_R2
        62.2%
        34%
        12.6
        Sample_PRO1747_PlateH_F6_R1
        60.8%
        31%
        11.2
        Sample_PRO1747_PlateH_F6_R2
        61.2%
        31%
        11.2
        Sample_PRO1747_PlateH_F7_R1
        52.8%
        35%
        13.3
        Sample_PRO1747_PlateH_F7_R2
        52.7%
        35%
        13.3
        Sample_PRO1747_PlateH_F8_R1
        52.6%
        34%
        11.1
        Sample_PRO1747_PlateH_F8_R2
        52.6%
        34%
        11.1
        Sample_PRO1747_PlateH_F9_R1
        48.2%
        35%
        12.1
        Sample_PRO1747_PlateH_F9_R2
        47.9%
        35%
        12.1
        Sample_PRO1747_PlateH_G10_R1
        47.1%
        36%
        10.2
        Sample_PRO1747_PlateH_G10_R2
        48.0%
        36%
        10.2
        Sample_PRO1747_PlateH_G11_R1
        45.5%
        34%
        10.9
        Sample_PRO1747_PlateH_G11_R2
        45.9%
        34%
        10.9
        Sample_PRO1747_PlateH_G12_R1
        97.0%
        38%
        9.4
        Sample_PRO1747_PlateH_G12_R2
        96.1%
        38%
        9.4
        Sample_PRO1747_PlateH_G1_R1
        13.0%
        37%
        0.0
        Sample_PRO1747_PlateH_G1_R2
        13.7%
        37%
        0.0
        Sample_PRO1747_PlateH_G2_R1
        50.0%
        35%
        11.2
        Sample_PRO1747_PlateH_G2_R2
        50.9%
        35%
        11.2
        Sample_PRO1747_PlateH_G3_R1
        64.2%
        33%
        7.6
        Sample_PRO1747_PlateH_G3_R2
        64.6%
        33%
        7.6
        Sample_PRO1747_PlateH_G4_R1
        35.1%
        33%
        11.1
        Sample_PRO1747_PlateH_G4_R2
        35.0%
        33%
        11.1
        Sample_PRO1747_PlateH_G5_R1
        58.0%
        36%
        7.8
        Sample_PRO1747_PlateH_G5_R2
        59.1%
        36%
        7.8
        Sample_PRO1747_PlateH_G6_R1
        65.8%
        34%
        5.7
        Sample_PRO1747_PlateH_G6_R2
        65.5%
        34%
        5.7
        Sample_PRO1747_PlateH_G7_R1
        56.2%
        32%
        12.0
        Sample_PRO1747_PlateH_G7_R2
        56.0%
        32%
        12.0
        Sample_PRO1747_PlateH_G8_R1
        61.5%
        34%
        8.8
        Sample_PRO1747_PlateH_G8_R2
        62.2%
        34%
        8.8
        Sample_PRO1747_PlateH_G9_R1
        63.1%
        32%
        6.9
        Sample_PRO1747_PlateH_G9_R2
        61.8%
        32%
        6.9
        Sample_PRO1747_PlateH_H10_R1
        53.4%
        35%
        13.6
        Sample_PRO1747_PlateH_H10_R2
        52.4%
        35%
        13.6
        Sample_PRO1747_PlateH_H11_R1
        57.0%
        33%
        12.7
        Sample_PRO1747_PlateH_H11_R2
        56.2%
        33%
        12.7
        Sample_PRO1747_PlateH_H1_R1
        48.4%
        34%
        10.0
        Sample_PRO1747_PlateH_H1_R2
        48.4%
        34%
        10.0
        Sample_PRO1747_PlateH_H2_R1
        47.8%
        35%
        12.5
        Sample_PRO1747_PlateH_H2_R2
        47.2%
        35%
        12.5
        Sample_PRO1747_PlateH_H3_R1
        33.3%
        35%
        8.4
        Sample_PRO1747_PlateH_H3_R2
        34.5%
        35%
        8.4
        Sample_PRO1747_PlateH_H4_R1
        36.9%
        35%
        9.5
        Sample_PRO1747_PlateH_H4_R2
        35.2%
        35%
        9.5
        Sample_PRO1747_PlateH_H5_R1
        57.8%
        33%
        9.8
        Sample_PRO1747_PlateH_H5_R2
        57.1%
        33%
        9.8
        Sample_PRO1747_PlateH_H6_R1
        44.5%
        34%
        8.0
        Sample_PRO1747_PlateH_H6_R2
        46.5%
        34%
        8.0
        Sample_PRO1747_PlateH_H7_R1
        49.9%
        34%
        10.8
        Sample_PRO1747_PlateH_H7_R2
        49.6%
        34%
        10.8
        Sample_PRO1747_PlateH_H8_R1
        56.0%
        36%
        11.6
        Sample_PRO1747_PlateH_H8_R2
        55.4%
        36%
        11.6
        Sample_PRO1747_PlateH_H9_R1
        40.4%
        33%
        11.3
        Sample_PRO1747_PlateH_H9_R2
        40.2%
        33%
        11.3

        FastQC

        FastQC is a quality control tool for high throughput sequence data, written by Simon Andrews at the Babraham Institute in Cambridge.

        Sequence Quality Histograms

        The mean quality value across each base position in the read. See the FastQC help.

        Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).


        Per Sequence Quality Scores

        The number of reads with average quality scores. Shows if a subset of reads has poor quality. See the FastQC help.

        Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).


        Per Base Sequence Content

        The proportion of each base position for which each of the four normal DNA bases has been called. See the FastQC help.

        Click a sample row to see a line plot for that dataset.
        Rollover for sample name
        Position: -
        %T: -
        %C: -
        %A: -
        %G: -

        Per Sequence GC Content

        The average GC content of reads. Normal random library typically have a roughly normal distribution of GC content. See the FastQC help.

        Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).


        Per Base N Content

        The percentage of base calls at each position for which an N was called. See the FastQC help.

        Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).


        Sequence Length Distribution

        The distribution of fragment sizes (read lengths) found. See the FastQC help.

        Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).


        Sequence Duplication Levels

        The relative level of duplication found for every sequence. See the FastQC help.

        Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).


        Overrepresented sequences

        The total amount of overrepresented sequences found in each library. See the FastQC help for further information.

        Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).


        Adapter Content

        The cumulative percentage count of the proportion of your library which has seen each of the adapter sequences at each position. See the FastQC help. Only samples with ≥ 0.1% adapter contamination are shown.

        Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).